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Outside Pubs Referencing P41-RR12553

Last update on 5/1/2014

NOTE: The following references turned up as hits while searching relevant terms according to a search engine, however it was not always possible to verify the validity of each reference. Anything potentially relevant was included. Please help improve the quality of this list by removing references you are able to determine are not relevant. Thanks, Erik.


Simon Toralba, Gérard Landemore, Maëlle Coquemont, Benoit Plancoulaine, Françoise Chapon
"Cavernomas of the human brainstem: 3-dimensional reconstruction from histological slides using computerized techniques" 2014.


Lance D. Burrell, Benjamin D. Horne, Jeffrey L. Anderson, J. Brent Muhlestein, Brian K. Whisenant
"Usefulness of Left Atrial Appendage Volume as a Predictor of Embolic Stroke in Patients With Atrial Fibrillation"
The American Journal of Cardiology, Volume 112, Issue 8, 15 October 2013, Pages 1148–1152

Edward J. Ciaccio, Christina A. Tennyson, Govind Bhagat, Suzanne K. Lewis, Peter H.R. Green
"Use of shape-from-shading to estimate three-dimensional architecture in the small intestinal lumen of celiac and control patients"
Computer Methods and Programs in Biomedicine, Volume 111, Issue 3, September 2013, Pages 676–684
DOI: 10.1016/j.cmpb.2013.06.002

Yagna Pathak, Brian H. Kopell, Aniko Szabo, Charles Rainey, Harold Harsch, Christopher R. Butson
"The Role of Electrode Location and Stimulation Polarity in Patient Response to Cortical Stimulation for Major Depressive Disorder"
Brain Stimulation, Volume 6, Issue 3, May 2013, Pages 254–260

Rampersad, S.M.; Stegeman, D.F. ; Oostendorp, T.F.
"Single-Layer Skull Approximations Perform Well in Transcranial Direct Current Stimulation Modeling"
Neural Systems and Rehabilitation Engineering, IEEE Transactions on  (Volume:21 ,  Issue: 3 ) pp. 346--353, 2013.

Yesim Serinagaoglu Dogrusoz, Alireza Mazloumi Gavgani
"Genetic algorithm-based regularization parameter estimation for the inverse electrocardiography problem using multiple constraints"
Medical & Biological Engineering & Computing, April 2013, Volume 51, Issue 4, pp 367-375
DOI: 10.1007/s11517-012-1005-6


Edward J. Ciaccio, Christina A. Tennyson, Govind Bhagat, Suzanne K. Lewis, Peter H. Green.
"Quantitative Estimates of Motility from Videocapsule Endoscopy Are Useful to Discern Celiac Patients from Controls"
Digestive Diseases and Sciences, November 2012, Volume 57, Issue 11, pp 2936-2943

Gavgani, A.M.; Dogrusoz, Y.S., "Noise reduction using anisotropic diffusion filter in inverse electrocardiology," Engineering in Medicine and Biology Society (EMBC), 2012 Annual International Conference of the IEEE , vol., no., pp.5919,5922, Aug. 28 2012-Sept. 1 2012
doi: 10.1109/EMBC.2012.6347341

Paul P. Horley, Pedro Ribeiro, Vítor R. Vieira, Jesús González-Hernández, Yuri V. Vorobiev, Luis Gerardo Trápaga-Martínez.
"Particle density distribution in a pyramid-shaped quantum well"
Physica E: Low-dimensional Systems and Nanostructures, Volume 44, Issues 7–8, April–May 2012, Pages 1602–1607
DOI: 10.1016/j.physe.2012.04.003

Yagna Pathak, Brian H. Kopell, Aniko Szabo, Charles Rainey, Harold Harsch, Christopher R. Butson.
"The role of electrode location and stimulation polarity in patient response to cortical stimulation for major depressive disorder"
Brain Stimulation, Available online 13 July 2012
DOI: 10.1016/j.brs.2012.07.001

Jorg Polzehl, Karsten Tabelow
"Structural Adaptive Smoothing: Principles and Applications in Imaging"
Mathematical Methods for Signal and Image Analysis and Representation
Computational Imaging and Vision Volume 41, pp 65-81, 2012
DOI: 10.1007/978-1-4471-2353-8_4

Rampersad, S.M.; Stegeman, D.F.; Oostendorp, T.F., "Single-Layer Skull Approximations Perform Well in Transcranial Direct Current Stimulation Modeling," Neural Systems and Rehabilitation Engineering, IEEE Transactions on , vol.PP, no.99, pp.1,1, 0, 27 July 2012
doi: 10.1109/TNSRE.2012.2206829


Umit Aydin, Yesim Serinagaoglu Dogrusoz
"A Kalman filter-based approach to reduce the effects of geometric errors and the measurement noise in the inverse ECG problem"
Medical & Biological Engineering & Computing, September 2011, Volume 49, Issue 9, pp 1003-1013
DOI: 10.1007/s11517-011-0757-8

Christopher R. Butson, Scott E. Cooper, Jaimie M. Henderson, Barbara Wolgamuth, Cameron C. McIntyre.
"Probabilistic analysis of activation volumes generated during deep brain stimulation"
NeuroImage, Volume 54, Issue 3, 1 February 2011, Pages 2096–2104

Edward J Ciaccio, Angelo B Biviano, William Whang, James Coromilas, Hasan Garan.
"A new transform for the analysis of complex fractionated atrial electrograms"
BioMedical Engineering OnLine, 2011, 10:35.

Lindsey J Healy, Yi Jiang, Edward W Hsu.
"Quantitative comparison of myocardial fiber structure between mice, rabbit, and sheep using diffusion tensor cardiovascular magnetic resonance"
Journal of Cardiovascular Magnetic Resonance 2011, 13:74.

Rampersad, S.; Stegeman, D.; Oostendorp, T., "On handling the layered structure of the skull in transcranial direct current stimulation models," Engineering in Medicine and Biology Society,EMBC, 2011 Annual International Conference of the IEEE , vol., no., pp.1989,1992, Aug. 30 2011-Sept. 3 2011
doi: 10.1109/IEMBS.2011.6090560


Ramón Casero, Rebecca A. B. Burton, T. Alexander Quinn, Christian Bollensdorff, Patrick Hales, Jürgen E. Schneider, Peter Kohl, Vicente Grau
"Towards High-Resolution Cardiac Atlases: Ventricular Anatomy Descriptors for a Standardized Reference Frame"
Statistical Atlases and Computational Models of the Heart, Lecture Notes in Computer Science Volume 6364, 2010, pp 75-84
DOI: 10.1007/978-3-642-15835-3_8

Edward J. Ciaccio, Christina A. Tennyson, Suzanne K. Lewis, Suneeta Krishnareddy, Govind Bhagat, Peter H.R. Green.
"Distinguishing patients with celiac disease by quantitative analysis of videocapsule endoscopy images"
Computer Methods and Programs in Biomedicine, Volume 100, Issue 1, October 2010, Pages 39–48
DOI: 10.1016/j.cmpb.2010.02.005

Bruce Hopenfeld, Hiroshi Ashikaga.
"Origin of the Electrocardiographic U Wave: Effects of M Cells and Dynamic Gap Junction Coupling"
Annals of Biomedical Engineering, March 2010, Volume 38, Issue 3, pp 1060-1070
DOI: 10.1007/s10439-010-9941-5

T. Masselter, T. Haushahn, F. Cichy, M. Gude, T. Speck.
"Ramifications in Plant Stems as Concept Generators for Branched Technical Fiber-Reinforced Composites"
6th World Congress of Biomechanics (WCB 2010). August 1-6, 2010 Singapore IFMBE Proceedings Volume 31, 2010, pp 36-39
DOI: 10.1007/978-3-642-14515-5_10

P. Šovícek, Š. Havránek, J. Šimek, M. Zborník, M. Mlcek, O. Kittnar.
"Isopotential ECG Imaging Correctly Identified Endocardial Ectopic Activation Site in the Case of Arrhythmia from Right Ventricular Outflow Tract"
World Congress on Medical Physics and Biomedical Engineering, September 7 - 12, 2009, Munich, Germany
IFMBE Proceedings Volume 25/4, 2010, pp 1965-1968
DOI: 10.1007/978-3-642-03882-2_522

J. Polzehl, K. Tabelow
"Statistical issues in accessing brain functionality and anatomy"
Weierstrass Institute for Applied Analysis and Stochastics, 2010

Karsten Tabelow
"Structural adaptive smoothing fMRI and DTI data"
Weierstrass Institute for Applied Analysis and Stochastics, Workshop on Novel Reconstruction Strategies in NMR and MRI, September 11, 2010


J. Polzehl, K. Tabelow
"Structural adaptive smoothing Diffusion Tensor Imaging data: the R-Package dti"
Weierstrass Institute for Applied Analysis and Stochastics, 2009.

Jorg Polzehl, Karsten Tabelow. "Structural Adaptive Smoothing in Diffusion Tensor Imaging: The R Package dti" Journal of Statistical Software, September 2009, Volume 31, Issue 9. 2009 [1]

J. Polzehl, K. Tabelow
"Eigenvalue perturbation theory of structured matrices under generic structured rank one perturbations: General results and complex matrices"
Weierstrass Institute for Applied Analysis and Stochastics, 2009.

Jorg Polzehl and Karsten Tabelow. "Structural adaptive smoothing: Principles and applications in imaging" [2]


Xavier Tricoche, Gordon Kindlmann, C.-F. Westin. "Invariant crease lines for topological and structural analysis of tensor fields." (manuscript #106068) IEEE Transactions on Visualization and Computer Graphics, Vol. 14, No. 6, pp.1627--1634, 2008. [3]

Burak Erem, Gregory C. Sharp, Ziji Wu and David Kaeli. "Interactive Deformable Registration Visualization and Analysis of 4D Computed Tomograph", Medical Biometrics, Lecture Notes in Computer Science pp. 232-239, 2008. [4]

Dakun Lai; Taotao Cao; Zuxiang Fang, "Modeling and Simulation of Three Orthogonal Transthoracic Electrical-Fields for Localization Method of Intracardiac Catheter," Bioinformatics and Biomedical Engineering, 2008. ICBBE 2008. The 2nd International Conference on , vol., no., pp.1461,1463, 16-18 May 2008
doi: 10.1109/ICBBE.2008.694

Jonah H. Lee
"Plane Strain Indentation Of Snow At The Microscale"
Proceedings of the ASME 2008 International Design Engineering Technical Conferences & Computers and Information in Engineering Conference
IDETC/CIE 2008, August 3-6, 2008, Brooklyn, New York, USA


Gordon Kindlmann, Xavier Tricoche, Carl-Fredrik Westin. "Delineating white matter structure in diffusion tensor MRI with anisotropy creases" Medical Image Analysis, Volume 11, Issue 5, October 2007, Pages 492-502

LAI Da-kun, CAO Tao-tao, WU Xiao-mei, and FANG Zu-xiang. "Optimization of Electrodes Displacement for Transthoracic Defibrillation: A Simulation Study on Spatial Configuration Pattern" International Journal of Bioelectromagnetism, Vol. 9 No. 1 2007. [5]


Kindlmann G, Tricoche X, Westin CF. "Anisotropy creases delineate white matter structure in diffusion tensor MRI" Med Image Comput Comput Assist Interv. 2006;9(Pt 1):126-33. 2006. [6]

Kensuke Sekihara, Kenneth Hild II, Srikantan S. Nagarajan. "A novel adaptive beamformer for MEG source reconstruction effective when large background brain activities exist" IEEE Trans Biomed Eng, 2006. [7]


S.E. Kruger, D.D. Schnack, C.R. Sovinec. "Dynamics of the major disruption of a DIII-D plasma" Phys. Plasmas 12, 056113, April 20, 2005. [8]

Kensuke Sekihara, Maneesh Sahani and Srikantan S. Nagarajan. "Localization bias and spatial resolution of adaptive and non-adaptive spatial filters for MEG source reconstruction" NeuroImage, Volume 25, Issue 4, 1 May 2005, Pages 1056-1067. [9]


K. Sekihara, S.S. Nagarajan, D. Poeppel, A. Marantz. "Performance of an MEG adaptive-beamformer source reconstruction technique in the presence of additive low-rank interference" Volume: 51, Issue: 1, On page(s): 90- 99, Jan. 2004. [10]

K. Sekihara, S.S. Nagarajan, D. Poeppel, A. Marantz. "Asymptotic SNR of scalar and vector minimum-variance beamformers for neuromagnetic source reconstruction" Volume: 51, Issue: 10 On page(s): 1726-1734, Oct. 2004. [11]